| Premier Division | P | W | D | L | F | A | +/- | Pts |
| |
| Duckpond | 16 | 15 | 0 | 1 | 53 | 20 | 33 | 42 |
| Romania Athletic | 16 | 12 | 0 | 3 | 56 | 23 | 33 | 36 |
| Sunday Shrimpers | 16 | 8 | 0 | 7 | 45 | 35 | 10 | 24 |
| Marquis | 16 | 8 | 0 | 7 | 45 | 36 | 9 | 24 |
| FC Byair | 16 | 5 | 1 | 7 | 26 | 45 | -19 | 19 |
| Vagabonds | 16 | 5 | 3 | 7 | 24 | 33 | -9 | 18 |
| St Johns | 16 | 5 | 2 | 8 | 32 | 34 | -2 | 17 |
| City Saints | 16 | 5 | 1 | 10 | 28 | 27 | 1 | 16 |
| Ramsey & Mistley | 16 | 1 | 1 | 14 | 24 | 80 | -56 | 4 |
| Wormingford Wanderers | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| Outstanding fines and pitch fees caused the remaining matches to be withdrawn and subsequently declared void. |
| 11/11/18 - Marquis played ineligible players v FC Byair. 3pts deducted from Marquis, 3pts awarded to FC Byair. |
| 09/09/18 - Duckpond played an ineligible player v Marquis. 3pts deducted from Duckpond, 3pts awarded to Marquis. Confirmed following appeal to ECFA Feb/Mar 2019 |
| Wormingford Wanderers withdrew before the start of the season |
| City Saints withdrawn - rule 22D, all remaining matches awarded to opponents. |
| |
| Division 1 | P | W | D | L | F | A | +/- | Pts |
| |
| Vikings Flag | 18 | 15 | 1 | 2 | 85 | 18 | 67 | 46 |
| Queens Arms | 18 | 14 | 2 | 2 | 60 | 25 | 35 | 44 |
| Harts | 18 | 13 | 2 | 3 | 72 | 27 | 45 | 41 |
| Fifteen Degrees | 18 | 9 | 1 | 8 | 54 | 49 | 5 | 28 |
| Fordham Athletic | 18 | 8 | 3 | 7 | 44 | 40 | 4 | 27 |
| Sokretez | 18 | 8 | 0 | 10 | 50 | 51 | -1 | 24 |
| Iceni Wanderers | 18 | 7 | 3 | 8 | 50 | 53 | -3 | 24 |
| Madrid Wanderers | 18 | 6 | 3 | 9 | 50 | 53 | -3 | 21 |
| Pathfields | 18 | 2 | 0 | 16 | 38 | 76 | -38 | 6 |
| Newtown Rovers | 18 | 0 | 1 | 17 | 19 | 130 | -111 | 1 |
| Highwaymen | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| Highwaymen withdrawn - league record expunged. |
| |
| Division 2 | P | W | D | L | F | A | +/- | Pts |
| |
| CO4 Ultras | 16 | 16 | 0 | 0 | 95 | 19 | 76 | 48 |
| Great Clacton Utd | 16 | 11 | 2 | 3 | 56 | 28 | 28 | 35 |
| Dovercourt Rovers | 16 | 11 | 1 | 4 | 66 | 21 | 45 | 34 |
| Cusa | 16 | 10 | 1 | 5 | 46 | 33 | 13 | 31 |
| Ramsey & Mistley Res | 16 | 6 | 2 | 8 | 38 | 43 | -5 | 20 |
| Stone Island | 16 | 5 | 1 | 10 | 37 | 78 | -41 | 16 |
| Tavern | 16 | 4 | 2 | 10 | 50 | 52 | -2 | 14 |
| Great Oakley | 16 | 3 | 0 | 13 | 22 | 71 | -49 | 9 |
| Bullers | 16 | 1 | 1 | 14 | 18 | 83 | -65 | 4 |
| Thorpmund | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| Thorpmund withdrew before the start of the season |
| |
| Division 3 | P | W | D | L | F | A | +/- | Pts |
| |
| Feering Village | 16 | 14 | 1 | 1 | 79 | 12 | 67 | 43 |
| Riverbank Athletic | 16 | 14 | 1 | 1 | 87 | 17 | 70 | 40 |
| Colchester Crusaders | 16 | 8 | 3 | 5 | 39 | 44 | -5 | 27 |
| Phoenix | 16 | 8 | 1 | 7 | 39 | 43 | -4 | 25 |
| Dedham Athletic | 16 | 7 | 2 | 7 | 50 | 30 | 20 | 23 |
| Sokretez Res | 16 | 6 | 0 | 10 | 34 | 80 | -46 | 15 |
| Pitchbury | 16 | 2 | 2 | 12 | 21 | 66 | -45 | 13 |
| Ramsey & Mistley A | 16 | 3 | 2 | 11 | 31 | 67 | -36 | 11 |
| Vagabonds Res | 16 | 3 | 2 | 11 | 31 | 52 | -21 | 10 |
| 02/09/18 - Sokretez Res played an ineligible player v Pitchbury. 3pts awarded to Pitchbury. |
| 02/09/18 - Riverbank & Vagabonds Res played ineligible players - result deemed void, 3pts deducted from Riverbank. |
| 14/10/18 - Vagabonds Res played and ineligible player v Pitchbury. Result was 3-3 so 1pt deducted from Vagabonds Res, 2pts awarded to Pitchbury |
| Old Heath Barbarians withdrew before the start of the season, replaced by Phoenix FC in accordance with league rule 6K |
